STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL49Mitochondrial ribosomal protein L49. (140 aa)    
Predicted Functional Partners:
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.994
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.989
MRPL55
Mitochondrial ribosomal protein L55.
   
 
 0.986
MTERF4
Mitochondrial transcription termination factor 4.
    
 
 0.980
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.979
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.977
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.975
MRPL45
Mitochondrial ribosomal protein L45.
   
 
 0.973
ENSCAPP00000012773
annotation not available
   
 
 0.972
ENSCAPP00000009423
annotation not available
   
 
 0.971
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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