STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL49Mitochondrial ribosomal protein L49. (140 aa)    
Predicted Functional Partners:
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.993
MRPL27
Mitochondrial ribosomal protein L27.
   
   0.992
ENSCAPP00000006634
annotation not available
   
 
 0.991
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.990
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.989
ENSCAPP00000011294
annotation not available
   
   0.985
MRPS16
Mitochondrial ribosomal protein S16.
   
 
 0.985
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.985
ENSCAPP00000013732
annotation not available
   
 
 0.984
MRPS25
Mitochondrial ribosomal protein S25.
   
   0.982
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.