STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD4Neuronal differentiation 4. (211 aa)    
Predicted Functional Partners:
PAX6
Paired box 6.
   
 
 0.700
TCF3
Transcription factor 3.
    
 
 0.678
ENSCAPP00000011786
annotation not available
    
 
 0.669
TCF4
Transcription factor 4.
    
 
 0.669
HEY1
Hes related family bHLH transcription factor with YRPW motif 1.
   
 0.638
HEYL
Hes related family bHLH transcription factor with YRPW motif like.
   
 0.638
GART
annotation not available
      
 0.593
LGSN
Lengsin, lens protein with glutamine synthetase domain.
     
 0.587
GLUL
Glutamate-ammonia ligase.
     
 0.587
CUX2
Cut like homeobox 2.
     
 0.577
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.