STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001768annotation not available (93 aa)    
Predicted Functional Partners:
HSPD1
Heat shock protein family D (Hsp60) member 1.
  
 0.999
MDH2
Malate dehydrogenase 2.
  
 
 0.978
GRPEL1
GrpE like 1, mitochondrial.
  
 
 0.955
GRPEL2
GrpE like 2, mitochondrial.
  
 
 0.919
ETHE1
ETHE1 persulfide dioxygenase.
   
 
 0.908
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.882
CLPP
Caseinolytic mitochondrial matrix peptidase proteolytic subunit.
  
 
 0.877
ENSCAPP00000010338
annotation not available
   
  
 0.863
RANBP2
RAN binding protein 2.
  
 
 0.858
ENSCAPP00000001068
annotation not available
   
 
 0.829
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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