Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GABRA1Gamma-aminobutyric acid type A receptor alpha1 subunit. (429 aa)    
Predicted Functional Partners:
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
   
 0.998
GABRG2
Gamma-aminobutyric acid type A receptor gamma2 subunit.
   
 0.998
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
   
 0.998
ENSCAPP00000017223
annotation not available
   
 0.997
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit.
   
 
 0.992
GABRG1
Gamma-aminobutyric acid type A receptor gamma1 subunit.
   
 0.989
GABRA3
Gamma-aminobutyric acid type A receptor alpha3 subunit.
   
  0.988
GABRA4
Gamma-aminobutyric acid type A receptor alpha4 subunit.
   
 0.976
GABRA6
Gamma-aminobutyric acid type A receptor alpha6 subunit.
   
 0.974
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
   
 0.970
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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