Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
P3H3Prolyl 3-hydroxylase 3. (536 aa)    
Predicted Functional Partners:
ENSCAPP00000011777
annotation not available
   
 0.941
PPIC
Peptidylprolyl isomerase C.
    
 0.715
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 
 0.671
ENSCAPP00000012046
annotation not available
    
  0.639
ENSCAPP00000010204
annotation not available
   
 
 0.605
TICRR
TOPBP1 interacting checkpoint and replication regulator.
    
 0.593
DPAGT1
Dolichyl-phosphate N-acetylglucosaminephosphotransferase 1.
      
 0.570
ZCCHC14
Zinc finger CCHC-type containing 14.
      
 0.569
WDR19
WD repeat domain 19.
      
 0.568
ENSCAPP00000000528
annotation not available
    
   0.558
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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