STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H3Prolyl 3-hydroxylase 3. (536 aa)    
Predicted Functional Partners:
ENSCAPP00000011777
annotation not available
   
 0.833
PPIC
Peptidylprolyl isomerase C.
   
 0.735
TICRR
TOPBP1 interacting checkpoint and replication regulator.
   
 0.597
COL5A2
Collagen type V alpha 2 chain.
   
  0.583
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.572
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.569
COL1A2
Collagen type I alpha 2 chain.
   
  0.564
DCN
Decorin.
      
 0.563
COL6A2
Collagen type VI alpha 2 chain.
   
 0.562
COL3A1
Collagen type III alpha 1 chain.
   
  0.551
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.