Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001780annotation not available (296 aa)    
Predicted Functional Partners:
ENSCAPP00000012056
annotation not available
    
 0.999
POT1
Protection of telomeres 1.
   
 0.999
XRCC6
X-ray repair cross complementing 6.
    
 0.991
ENSCAPP00000017493
annotation not available
    
 0.986
ENSCAPP00000005433
annotation not available
    
 0.983
NBN
Nibrin.
    
 0.981
ENSCAPP00000014899
annotation not available
    
 0.980
ENSCAPP00000013163
annotation not available
    
 0.973
CTC1
CST telomere replication complex component 1.
     
 0.963
BLM
BLM RecQ like helicase.
    
 0.961
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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