STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCH1GTP cyclohydrolase 1. (135 aa)    
Predicted Functional Partners:
GCHFR
GTP cyclohydrolase I feedback regulator.
    
 0.987
ITPA
Inosine triphosphatase.
  
 
 0.947
PTS
6-pyruvoyltetrahydropterin synthase.
  
 
 0.937
ENSCAPP00000007718
annotation not available
  
 
 0.926
NIF3L1
NGG1 interacting factor 3 like 1.
    
 0.888
GART
annotation not available
  
  
 0.883
NME3
NME/NM23 nucleoside diphosphate kinase 3.
   
 0.847
NME1
NME/NM23 nucleoside diphosphate kinase 1.
   
 0.847
NME6
NME/NM23 nucleoside diphosphate kinase 6.
   
 0.845
NME7
NME/NM23 family member 7.
   
 0.845
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.