STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRTAP8-1Keratin associated protein 8-1. (63 aa)    
Predicted Functional Partners:
KRTAP11-1
Keratin associated protein 11-1.
   
 
 0.958
ENSCAPP00000009285
annotation not available
   
  
 0.723
ENSCAPP00000005305
annotation not available
   
 
 0.703
ENSCAPP00000003293
annotation not available
  
 
 0.529
ENSCAPP00000001353
annotation not available
  
 
 0.528
HAMP
Hepcidin antimicrobial peptide.
   
    0.525
ENSCAPP00000012124
annotation not available
  
 
 0.476
ENSCAPP00000011466
annotation not available
  
 
 0.469
ENSCAPP00000012179
annotation not available
   
    0.463
KRTAP16-1
Keratin associated protein 16-1.
     
 0.459
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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