Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRTAP8-1Keratin associated protein 8-1. (63 aa)    
Predicted Functional Partners:
KRTAP11-1
Keratin associated protein 11-1.
   
 
 0.969
KRTAP27-1
Keratin associated protein 27-1.
   
 
 0.834
ENSCAPP00000005305
annotation not available
   
 
 0.757
ENSCAPP00000009285
annotation not available
   
  
 0.705
KRT27
Keratin 27.
   
  
 0.684
HAMP
Hepcidin antimicrobial peptide.
   
    0.682
ENSCAPP00000012179
annotation not available
   
    0.653
ENSCAPP00000000243
annotation not available
      
 0.615
ENSCAPP00000012124
annotation not available
  
 
 0.597
ENSCAPP00000011466
annotation not available
  
 
 0.592
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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