STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001789annotation not available (88 aa)    
Predicted Functional Partners:
TARBP2
TARBP2 subunit of RISC loading complex.
    
 
 0.529
DHX9
DExH-box helicase 9.
   
 
 0.509
ENSCAPP00000016515
annotation not available
    
 
 0.506
ENSCAPP00000017678
annotation not available
    
   0.502
PUM2
Pumilio RNA binding family member 2.
   
 
 0.430
PRKRA
Protein activator of interferon induced protein kinase EIF2AK2.
    
 
 0.422
EIF2AK3
Eukaryotic translation initiation factor 2 alpha kinase 3.
    
 
 0.414
STAU1
Staufen double-stranded RNA binding protein 1.
    
 
 0.413
CD247
CD247 molecule.
   
   0.409
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.408
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.