GRPEL1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

GRPEL1

GrpE like 1, mitochondrial. (218 aa)

Predicted Functional Partners:

TIMM44

0.999

GRPEL2

0.997

TIMM17A

0.996

TIMM17B

0.985

PAM16

0.979

TIMM50

0.971

ENSCAPP00000008186

0.968

ENSCAPP00000001768

0.955

HSPD1

0.942

CLPB

0.927

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLPB	ENSCAPP00000001768	ENSCAPP00000018443	ENSCAPP00000001768	ClpB homolog, mitochondrial AAA ATPase chaperonin.	annotation not available	0.882
CLPB	GRPEL1	ENSCAPP00000018443	ENSCAPP00000001797	ClpB homolog, mitochondrial AAA ATPase chaperonin.	GrpE like 1, mitochondrial.	0.927
CLPB	GRPEL2	ENSCAPP00000018443	ENSCAPP00000007938	ClpB homolog, mitochondrial AAA ATPase chaperonin.	GrpE like 2, mitochondrial.	0.852
CLPB	HSPD1	ENSCAPP00000018443	ENSCAPP00000004139	ClpB homolog, mitochondrial AAA ATPase chaperonin.	Heat shock protein family D (Hsp60) member 1.	0.735
ENSCAPP00000001768	CLPB	ENSCAPP00000001768	ENSCAPP00000018443	annotation not available	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.882
ENSCAPP00000001768	GRPEL1	ENSCAPP00000001768	ENSCAPP00000001797	annotation not available	GrpE like 1, mitochondrial.	0.955
ENSCAPP00000001768	GRPEL2	ENSCAPP00000001768	ENSCAPP00000007938	annotation not available	GrpE like 2, mitochondrial.	0.919
ENSCAPP00000001768	HSPD1	ENSCAPP00000001768	ENSCAPP00000004139	annotation not available	Heat shock protein family D (Hsp60) member 1.	0.999
ENSCAPP00000008186	GRPEL1	ENSCAPP00000008186	ENSCAPP00000001797	annotation not available	GrpE like 1, mitochondrial.	0.968
ENSCAPP00000008186	GRPEL2	ENSCAPP00000008186	ENSCAPP00000007938	annotation not available	GrpE like 2, mitochondrial.	0.968
ENSCAPP00000008186	HSPD1	ENSCAPP00000008186	ENSCAPP00000004139	annotation not available	Heat shock protein family D (Hsp60) member 1.	0.421
ENSCAPP00000008186	PAM16	ENSCAPP00000008186	ENSCAPP00000013954	annotation not available	Presequence translocase associated motor 16.	0.989
ENSCAPP00000008186	TIMM17A	ENSCAPP00000008186	ENSCAPP00000011069	annotation not available	Translocase of inner mitochondrial membrane 17A.	0.996
ENSCAPP00000008186	TIMM17B	ENSCAPP00000008186	ENSCAPP00000001367	annotation not available	Translocase of inner mitochondrial membrane 17B.	0.995
ENSCAPP00000008186	TIMM44	ENSCAPP00000008186	ENSCAPP00000013489	annotation not available	Translocase of inner mitochondrial membrane 44.	0.995
ENSCAPP00000008186	TIMM50	ENSCAPP00000008186	ENSCAPP00000017305	annotation not available	Translocase of inner mitochondrial membrane 50.	0.997
GRPEL1	CLPB	ENSCAPP00000001797	ENSCAPP00000018443	GrpE like 1, mitochondrial.	ClpB homolog, mitochondrial AAA ATPase chaperonin.	0.927
GRPEL1	ENSCAPP00000001768	ENSCAPP00000001797	ENSCAPP00000001768	GrpE like 1, mitochondrial.	annotation not available	0.955
GRPEL1	ENSCAPP00000008186	ENSCAPP00000001797	ENSCAPP00000008186	GrpE like 1, mitochondrial.	annotation not available	0.968
GRPEL1	GRPEL2	ENSCAPP00000001797	ENSCAPP00000007938	GrpE like 1, mitochondrial.	GrpE like 2, mitochondrial.	0.997