Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POGKPogo transposable element derived with KRAB domain. (586 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
  0.889
TIGD3
Tigger transposable element derived 3.
      
 0.747
JRKL
JRK like.
      
 0.706
TIGD2
Tigger transposable element derived 2.
      
 0.692
ENSCAPP00000016527
annotation not available
      
 0.691
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.656
ENSCAPP00000003625
annotation not available
    
 
 0.651
EVI5L
Ecotropic viral integration site 5 like.
      
 0.648
ENSCAPP00000004212
annotation not available
    
   0.622
ENSCAPP00000014619
annotation not available
    
   0.622
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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