Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (1981 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
    
 0.998
ENSCAPP00000008774
annotation not available
    
 0.991
CEP164
Centrosomal protein 164.
    
 0.982
CNTRL
Centriolin.
   
 0.981
CCDC120
Coiled-coil domain containing 120.
    
 0.979
CEP83
Centrosomal protein 83.
    
 0.978
FBF1
Fas binding factor 1.
     
 0.974
CEP128
Centrosomal protein 128.
   
 0.971
CEP89
Centrosomal protein 89.
     
 0.969
ODF2
Outer dense fiber of sperm tails 2.
    
 0.964
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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