STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NINNinein. (1981 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
    
 0.982
CCDC120
Coiled-coil domain containing 120.
    
 0.967
CNTRL
Centriolin.
   
 0.966
ODF2
Outer dense fiber of sperm tails 2.
    
 0.964
CEP128
Centrosomal protein 128.
    
 0.964
CEP164
Centrosomal protein 164.
    
 0.964
CEP83
Centrosomal protein 83.
    
 0.961
ENSCAPP00000008774
annotation not available
    
 0.958
FBF1
Fas binding factor 1.
     
 0.935
CEP89
Centrosomal protein 89.
     
 0.932
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.