Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFHD1EF-hand domain family member D1. (145 aa)    
Predicted Functional Partners:
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 
 0.821
ACTR2
Actin related protein 2.
   
   0.799
ENSCAPP00000001703
annotation not available
   
   0.772
ARPC3
Actin related protein 2/3 complex subunit 3.
   
   0.687
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.644
ENSCAPP00000012429
annotation not available
    
   0.590
GPBAR1
G protein-coupled bile acid receptor 1.
   
   0.578
ENSCAPP00000009905
annotation not available
    
   0.449
ENSCAPP00000015470
annotation not available
      
 0.446
AMN1
Antagonist of mitotic exit network 1 homolog.
      
 0.438
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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