Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEK1NIMA related kinase 1. (1036 aa)    
Predicted Functional Partners:
ENSCAPP00000010416
annotation not available
    
 
 0.958
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
   
 
 0.917
NEK2
NIMA related kinase 2.
   
 
 0.906
ENSCAPP00000015657
annotation not available
    
 
 0.867
RPGRIP1L
RPGRIP1 like.
   
 
 0.824
VTN
Vitronectin.
    
   0.820
ENSCAPP00000012357
annotation not available
    
 
 0.795
LRRK1
Leucine rich repeat kinase 1.
    
   0.748
CENPF
Centromere protein F.
   
 0.717
ENSCAPP00000016241
annotation not available
   
  
 0.696
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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