STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK1NIMA related kinase 1. (1036 aa)    
Predicted Functional Partners:
ENSCAPP00000010416
annotation not available
    
 
 0.748
RPGRIP1L
RPGRIP1 like.
   
 
 0.704
NEK6
NIMA related kinase 6.
    
0.660
ENSCAPP00000017531
annotation not available
    
 0.660
ENSCAPP00000015657
annotation not available
    
 
 0.637
CENPF
Centromere protein F.
   
 0.606
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
   
  
 0.589
CDK1
Cyclin dependent kinase 1.
   
 
 0.588
PLK1
Polo like kinase 1.
   
0.562
PLK3
Polo like kinase 3.
   
0.553
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.