Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENKD1Enkurin domain containing 1. (252 aa)    
Predicted Functional Partners:
XRCC6
X-ray repair cross complementing 6.
    
 0.795
LIG4
DNA ligase 4.
   
 0.760
CEP104
Centrosomal protein 104.
      
 0.759
MPHOSPH9
M-phase phosphoprotein 9.
    
 
 0.744
TTC21B
Tetratricopeptide repeat domain 21B.
      
 0.736
XRCC1
X-ray repair cross complementing 1.
    
 0.717
PCNA
Proliferating cell nuclear antigen.
    
 0.710
LIG3
DNA ligase 3.
   
 0.689
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.675
POLD1
DNA polymerase delta 1, catalytic subunit.
  
 0.663
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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