Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001826annotation not available (650 aa)    
Predicted Functional Partners:
PLCG2
Phospholipase C gamma 2.
     
  0.911
PRKCG
Protein kinase C gamma.
     
  0.911
ENSCAPP00000006458
annotation not available
     
  0.911
PLCG1
Phospholipase C gamma 1.
     
  0.911
MAPK3
Mitogen-activated protein kinase 3.
     
  0.911
CHDH
Choline dehydrogenase.
     
 0.887
PLD2
Phospholipase D2.
     
 0.886
PISD
Phosphatidylserine decarboxylase.
  
 
  0.884
PLD1
Phospholipase D1.
     
 0.880
GDPD1
Glycerophosphodiester phosphodiesterase domain containing 1.
    
  0.870
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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