STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001828annotation not available (473 aa)    
Predicted Functional Partners:
ENSCAPP00000009222
annotation not available
   
0.933
LSM14A
LSM14A mRNA processing body assembly factor.
    
 0.921
ENSCAPP00000010706
annotation not available
  
 
0.899
ENSCAPP00000006991
annotation not available
  
 
0.886
YBX1
Y-box binding protein 1.
    
 0.876
STAU1
Staufen double-stranded RNA binding protein 1.
     
 0.874
PLK1
Polo like kinase 1.
    
 0.846
FMR1
FMRP translational regulator 1.
    
 0.838
CDK1
Cyclin dependent kinase 1.
    
  0.834
CCNB2
Cyclin B2.
     
 0.806
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.