Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001835annotation not available (91 aa)    
Predicted Functional Partners:
PAXIP1
PAX interacting protein 1.
    
 0.997
ENSCAPP00000007084
annotation not available
    
 0.997
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.995
ENSCAPP00000015921
annotation not available
    
 0.995
WDR5
WD repeat domain 5.
    
 0.992
KDM6B
Lysine demethylase 6B.
    
 0.990
KCTD13
Potassium channel tetramerization domain containing 13.
      
 0.882
PNO1
Partner of NOB1 homolog.
    
 0.835
GCC1
GRIP and coiled-coil domain containing 1.
    
 0.835
WSB2
WD repeat and SOCS box containing 2.
    
 0.814
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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