STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMKLBRibosomal modification protein rimK like family member B. (319 aa)    
Predicted Functional Partners:
ENSCAPP00000016502
annotation not available
     
 0.935
FOLH1
Folate hydrolase 1.
     
 0.910
RIMKLA
Ribosomal modification protein rimK like family member A.
  
  
 
0.908
OGDHL
Oxoglutarate dehydrogenase like.
   
 0.882
OGDH
Oxoglutarate dehydrogenase.
   
 0.882
IDH3G
Isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma.
    
 0.871
IDH3A
Isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha.
    
 0.871
CS
Citrate synthase.
    
 0.871
IDH1
Isocitrate dehydrogenase (NADP(+)) 1.
    
 0.850
IDH2
Isocitrate dehydrogenase (NADP(+)) 2.
    
 0.850
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.