STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYGO1Pygopus family PHD finger 1. (419 aa)    
Predicted Functional Partners:
BCL9
BCL9 transcription coactivator.
    
 0.939
CTNNB1
Catenin beta 1.
    
 0.892
JUP
Junction plakoglobin.
    
 0.863
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
ENSCAPP00000015921
annotation not available
    
 0.821
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.818
LEF1
Lymphoid enhancer binding factor 1.
    
 0.741
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.722
RANBP2
RAN binding protein 2.
    
 0.721
KDM6B
Lysine demethylase 6B.
    
 0.704
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.