Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRP10LDL receptor related protein 10. (692 aa)    
Predicted Functional Partners:
GSK3B
Glycogen synthase kinase 3 beta.
    
 0.771
APLP1
Amyloid beta precursor like protein 1.
    
 0.711
ENSCAPP00000000397
annotation not available
      
 0.667
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.657
ENSCAPP00000009320
annotation not available
    
 0.630
ENSCAPP00000001899
annotation not available
      
 0.627
ENSCAPP00000012837
annotation not available
      
 0.627
CORIN
Corin, serine peptidase.
    
 0.613
APOB
Apolipoprotein B.
    
 0.584
ENSCAPP00000001307
annotation not available
    
 0.579
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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