STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD6Ankyrin repeat domain 6. (689 aa)    
Predicted Functional Partners:
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.753
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.753
REL
REL proto-oncogene, NF-kB subunit.
   
 0.748
ENSCAPP00000015456
annotation not available
   
 0.748
ENSCAPP00000016597
annotation not available
   
 0.748
PRICKLE2
Prickle planar cell polarity protein 2.
    
 0.743
AXIN1
Axin 1.
    
 0.705
DVL1
Dishevelled segment polarity protein 1.
    
 0.702
APP
Amyloid beta precursor protein.
    
 0.701
PRICKLE3
Prickle planar cell polarity protein 3.
    
 0.698
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.