Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR12Proline rich 12. (1220 aa)    
Predicted Functional Partners:
PRRG2
Proline rich and Gla domain 2.
      
 0.751
ENSCAPP00000001835
annotation not available
      
 0.660
ENSCAPP00000013410
annotation not available
    
   0.613
INSC
INSC spindle orientation adaptor protein.
   
  
 0.577
SH3PXD2B
SH3 and PX domains 2B.
      
 0.572
ENSCAPP00000005682
annotation not available
      
 0.569
ENSCAPP00000008824
annotation not available
   
  
 0.530
SH3PXD2A
SH3 and PX domains 2A.
      
 0.526
MED23
Mediator complex subunit 23.
   
 
 0.501
PHRF1
PHD and ring finger domains 1.
   
  
 0.495
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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