STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001855annotation not available (105 aa)    
Predicted Functional Partners:
ENSCAPP00000001550
annotation not available
 
 0.972
MACROH2A2
macroH2A.2 histone.
 
 
 0.932
MACROH2A1
macroH2A.1 histone.
 
 
 0.932
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.932
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.930
H2AZ2
H2A.Z variant histone 2.
 
 
 0.912
ENSCAPP00000003947
annotation not available
 
 0.911
KDM6B
Lysine demethylase 6B.
    
 0.909
ENSCAPP00000010565
annotation not available
  
 0.880
ENSCAPP00000010208
annotation not available
 
 
 0.866
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.