STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001860annotation not available (174 aa)    
Predicted Functional Partners:
ENSCAPP00000004740
annotation not available
    
 0.894
PIH1D2
PIH1 domain containing 2.
   
 0.894
TTC25
Tetratricopeptide repeat domain 25.
   
  
 0.892
DCDC2
Doublecortin domain containing 2.
      
 0.889
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.865
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.854
CCDC103
Coiled-coil domain containing 103.
      
 0.817
RUVBL2
RuvB like AAA ATPase 2.
    
 0.810
IQCD
IQ motif containing D.
    
 
 0.806
RPAP3
RNA polymerase II associated protein 3.
    
 0.801
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.