Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MFSD13AMajor facilitator superfamily domain containing 13A. (517 aa)    
Predicted Functional Partners:
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.687
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.671
ENSCAPP00000011427
annotation not available
      
 0.618
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.601
SVOPL
SVOP like.
      
 0.580
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.579
ENSCAPP00000005630
annotation not available
      
 0.576
UNC93A
Unc-93 homolog A.
      
 0.571
SVOP
SV2 related protein.
      
 0.571
WDR75
WD repeat domain 75.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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