STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001869annotation not available (181 aa)    
Predicted Functional Partners:
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.701
CDC73
Cell division cycle 73.
    
 0.699
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.661
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.661
ENSCAPP00000018140
annotation not available
   
 
 0.623
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.605
C6
Complement C6.
   
  0.602
ENSCAPP00000005439
annotation not available
      
 0.578
C8B
Complement C8 beta chain.
   
 0.575
DAB1
DAB adaptor protein 1.
   
 0.559
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.