STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001874annotation not available (84 aa)    
Predicted Functional Partners:
ENSCAPP00000009519
annotation not available
   
 0.999
NAE1
NEDD8 activating enzyme E1 subunit 1.
    
 0.997
RBX1
Ring-box 1.
   
 0.992
CUL1
Cullin 1.
    
 0.989
DCUN1D5
Defective in cullin neddylation 1 domain containing 5.
    
 0.988
CUL3
Cullin 3.
    
 0.985
UBA1
Ubiquitin like modifier activating enzyme 1.
    
 0.981
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.974
GPS1
G protein pathway suppressor 1.
   
 
 0.967
COPS4
COP9 signalosome subunit 4.
    
 
 0.965
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.