STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R10Protein phosphatase 1 regulatory subunit 10. (927 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
   
 0.992
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.991
ENSCAPP00000000802
annotation not available
    
 0.989
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.989
TOX3
TOX high mobility group box family member 3.
    
 0.971
DDX39B
DExD-box helicase 39B.
   
  0.962
SETD4
SET domain containing 4.
    
 0.957
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
    
  0.956
PPP1R3B
Protein phosphatase 1 regulatory subunit 3B.
    
  0.952
SLC5A7
Solute carrier family 5 member 7.
      
 0.949
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.