Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001879annotation not available (305 aa)    
Predicted Functional Partners:
EIF4E
Eukaryotic translation initiation factor 4E.
   
 0.960
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
  0.956
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
  0.915
PABPC1L
poly(A) binding protein cytoplasmic 1 like.
   
 0.902
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.899
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.898
EIF4E1B
Eukaryotic translation initiation factor 4E family member 1B.
   
 0.896
MKRN2
Makorin ring finger protein 2.
    
 
 0.895
CSDE1
Cold shock domain containing E1.
   
 0.889
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
    
 0.876
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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