STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001890annotation not available (485 aa)    
Predicted Functional Partners:
PARG
poly(ADP-ribose) glycohydrolase.
    
 0.812
RFC5
Replication factor C subunit 5.
   
  0.758
RFC2
Replication factor C subunit 2.
   
  0.752
RFC4
Replication factor C subunit 4.
   
 0.750
PCNA
Proliferating cell nuclear antigen.
   
 0.698
XRCC6
X-ray repair cross complementing 6.
   
 
 0.685
BARD1
BRCA1 associated RING domain 1.
    
 0.681
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.641
LIG4
DNA ligase 4.
    
 
 0.637
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
    
 
 0.625
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.