Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LUZP1Leucine zipper protein 1. (1072 aa)    
Predicted Functional Partners:
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.938
BPTF
Bromodomain PHD finger transcription factor.
     
 0.924
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
     
  0.913
POLE3
DNA polymerase epsilon 3, accessory subunit.
     
  0.912
ENSCAPP00000008218
annotation not available
     
  0.912
RSF1
Remodeling and spacing factor 1.
     
  0.912
CHRAC1
Chromatin accessibility complex subunit 1.
     
  0.909
HMGXB4
HMG-box containing 4.
     
  0.908
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
  0.904
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
  0.904
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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