STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001900annotation not available (292 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.939
RBX1
Ring-box 1.
    
 0.928
CUL1
Cullin 1.
    
 0.873
CDC6
Cell division cycle 6.
    
 0.867
CUL3
Cullin 3.
    
 0.827
ENSCAPP00000005342
annotation not available
    
 0.747
CACUL1
CDK2 associated cullin domain 1.
    
 0.731
ENSCAPP00000009519
annotation not available
    
 0.722
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.710
ENSCAPP00000010366
annotation not available
    
  0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.