Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MFSD5Major facilitator superfamily domain containing 5. (386 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
     
  0.833
ENSCAPP00000011784
annotation not available
     
  0.833
SPRYD3
SPRY domain containing 3.
   
  
 0.767
RAD21L1
RAD21 cohesin complex component like 1.
     
  0.708
STAG1
Stromal antigen 1.
     
  0.708
RAD21
RAD21 cohesin complex component.
     
  0.708
ENSCAPP00000005567
annotation not available
      
 0.661
ENSCAPP00000008904
annotation not available
      
 0.661
MFSD9
Major facilitator superfamily domain containing 9.
   
  
 0.586
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.579
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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