Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001903annotation not available (344 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.896
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.892
CTNND1
Catenin delta 1.
    
 0.882
PTPRK
Protein tyrosine phosphatase receptor type K.
    
 0.812
ARVCF
ARVCF delta catenin family member.
    
 0.796
ENSCAPP00000011145
annotation not available
 
  
 0.792
PTPRA
Protein tyrosine phosphatase receptor type A.
 
  
 0.773
JUP
Junction plakoglobin.
    
  0.772
SKAP2
Src kinase associated phosphoprotein 2.
    
 0.739
PTPRU
Protein tyrosine phosphatase receptor type U.
   
   0.717
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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