ENSCAPP00000001904 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000001904

annotation not available (225 aa)

Predicted Functional Partners:

STRIP2

0.814

ARHGEF12

0.730

PDCD10

0.722

FLNC

0.699

AHDC1

0.687

ENSCAPP00000005006

0.643

ZNF521

0.636

STRN3

0.622

STRN4

0.622

STRIP1

0.618

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHDC1	ARHGEF12	ENSCAPP00000000710	ENSCAPP00000002577	AT-hook DNA binding motif containing 1.	Rho guanine nucleotide exchange factor 12.	0.687
AHDC1	ENSCAPP00000001904	ENSCAPP00000000710	ENSCAPP00000001904	AT-hook DNA binding motif containing 1.	annotation not available	0.687
AHDC1	ZNF521	ENSCAPP00000000710	ENSCAPP00000016168	AT-hook DNA binding motif containing 1.	Zinc finger protein 521.	0.595
ARHGEF12	AHDC1	ENSCAPP00000002577	ENSCAPP00000000710	Rho guanine nucleotide exchange factor 12.	AT-hook DNA binding motif containing 1.	0.687
ARHGEF12	ENSCAPP00000001904	ENSCAPP00000002577	ENSCAPP00000001904	Rho guanine nucleotide exchange factor 12.	annotation not available	0.730
ARHGEF12	ZNF521	ENSCAPP00000002577	ENSCAPP00000016168	Rho guanine nucleotide exchange factor 12.	Zinc finger protein 521.	0.595
ENSCAPP00000001904	AHDC1	ENSCAPP00000001904	ENSCAPP00000000710	annotation not available	AT-hook DNA binding motif containing 1.	0.687
ENSCAPP00000001904	ARHGEF12	ENSCAPP00000001904	ENSCAPP00000002577	annotation not available	Rho guanine nucleotide exchange factor 12.	0.730
ENSCAPP00000001904	ENSCAPP00000005006	ENSCAPP00000001904	ENSCAPP00000005006	annotation not available	annotation not available	0.643
ENSCAPP00000001904	FLNC	ENSCAPP00000001904	ENSCAPP00000015967	annotation not available	Filamin C.	0.699
ENSCAPP00000001904	PDCD10	ENSCAPP00000001904	ENSCAPP00000015847	annotation not available	Programmed cell death 10.	0.722
ENSCAPP00000001904	STRIP1	ENSCAPP00000001904	ENSCAPP00000003827	annotation not available	Striatin interacting protein 1.	0.618
ENSCAPP00000001904	STRIP2	ENSCAPP00000001904	ENSCAPP00000000793	annotation not available	Striatin interacting protein 2.	0.814
ENSCAPP00000001904	STRN3	ENSCAPP00000001904	ENSCAPP00000007874	annotation not available	Striatin 3.	0.622
ENSCAPP00000001904	STRN4	ENSCAPP00000001904	ENSCAPP00000014776	annotation not available	Striatin 4.	0.622
ENSCAPP00000001904	ZNF521	ENSCAPP00000001904	ENSCAPP00000016168	annotation not available	Zinc finger protein 521.	0.636
ENSCAPP00000005006	ENSCAPP00000001904	ENSCAPP00000005006	ENSCAPP00000001904	annotation not available	annotation not available	0.643
FLNC	ENSCAPP00000001904	ENSCAPP00000015967	ENSCAPP00000001904	Filamin C.	annotation not available	0.699
PDCD10	ENSCAPP00000001904	ENSCAPP00000015847	ENSCAPP00000001904	Programmed cell death 10.	annotation not available	0.722
PDCD10	STRIP1	ENSCAPP00000015847	ENSCAPP00000003827	Programmed cell death 10.	Striatin interacting protein 1.	0.998