STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001905annotation not available (109 aa)    
Predicted Functional Partners:
ENSCAPP00000008521
annotation not available
 
  
  0.886
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.711
ENSCAPP00000010366
annotation not available
    
 0.711
ENSCAPP00000000492
annotation not available
    
 0.641
ENSCAPP00000004155
annotation not available
    
 0.641
ENSCAPP00000014462
annotation not available
    
 0.641
ENSCAPP00000008157
annotation not available
    
 0.622
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.611
RXFP1
Relaxin family peptide receptor 1.
    
 0.611
RXFP2
Relaxin family peptide receptor 2.
    
 0.611
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.