STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM62Tripartite motif containing 62. (403 aa)    
Predicted Functional Partners:
CARD9
Caspase recruitment domain family member 9.
    
 
 0.720
TRIM44
Tripartite motif containing 44.
    
 
 0.629
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
  0.567
ICOS
Inducible T cell costimulator.
    
  0.560
ENSCAPP00000000492
annotation not available
    
  0.556
ENSCAPP00000004155
annotation not available
    
  0.556
ENSCAPP00000014462
annotation not available
    
  0.556
TRIM66
Tripartite motif containing 66.
      
 0.553
ENSCAPP00000001101
annotation not available
    
  0.534
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.534
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.