Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001907annotation not available (115 aa)    
Predicted Functional Partners:
ENSCAPP00000015332
annotation not available
   
 0.870
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.769
RBM8A
RNA binding motif protein 8A.
   
 0.768
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
  0.755
GALNT7
Polypeptide N-acetylgalactosaminyltransferase 7.
     
  0.755
ENSCAPP00000017572
annotation not available
   
 0.738
GPR162
G protein-coupled receptor 162.
    
 0.719
ATR
ATR serine/threonine kinase.
     
  0.699
ENSCAPP00000004459
annotation not available
   
 0.671
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.671
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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