STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHPN1Rhophilin Rho GTPase binding protein 1. (609 aa)    
Predicted Functional Partners:
ENSCAPP00000015929
annotation not available
    
 0.948
ENSCAPP00000005302
annotation not available
    
 0.823
CHMP4C
Charged multivesicular body protein 4C.
    
 0.764
CHMP4B
Charged multivesicular body protein 4B.
    
 0.764
RHOD
Ras homolog family member D.
    
 0.718
ENSCAPP00000012909
annotation not available
    
 0.703
ENSCAPP00000006439
annotation not available
    
 0.701
ENSCAPP00000000406
annotation not available
   
    0.673
ENSCAPP00000013259
annotation not available
    
 0.668
UEVLD
UEV and lactate/malate dehyrogenase domains.
    
 0.623
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.