Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAF1TNF receptor associated factor 1. (344 aa)    
Predicted Functional Partners:
TRAF2
TNF receptor associated factor 2.
    
 0.997
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
    
 0.995
TRAF6
TNF receptor associated factor 6.
    
 0.994
TANK
TRAF family member associated NFKB activator.
    
 0.991
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.989
TRADD
TNFRSF1A associated via death domain.
    
 0.988
ENSCAPP00000015425
annotation not available
    
 0.988
TNFRSF11A
TNF receptor superfamily member 11a.
    
 0.986
TRAF3
TNF receptor associated factor 3.
    
 0.985
BIRC2
Baculoviral IAP repeat containing 2.
   
 0.985
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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