ENSCAPP00000001916 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCAPP00000001916

annotation not available (85 aa)

Predicted Functional Partners:

RPP30

0.999

POP4

0.999

POP5

0.999

POP1

0.997

RPP25L

0.986

SNU13

0.981

KRI1

0.978

RPP40

0.932

AGO3

0.884

AGO1

0.879

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO1	AGO3	ENSCAPP00000008559	ENSCAPP00000010319	Argonaute RISC component 1.	Argonaute RISC catalytic component 3.	0.976
AGO1	ENSCAPP00000001916	ENSCAPP00000008559	ENSCAPP00000001916	Argonaute RISC component 1.	annotation not available	0.879
AGO1	RPP40	ENSCAPP00000008559	ENSCAPP00000002251	Argonaute RISC component 1.	Ribonuclease P/MRP subunit p40.	0.894
AGO1	SNU13	ENSCAPP00000008559	ENSCAPP00000006647	Argonaute RISC component 1.	Small nuclear ribonucleoprotein 13.	0.620
AGO3	AGO1	ENSCAPP00000010319	ENSCAPP00000008559	Argonaute RISC catalytic component 3.	Argonaute RISC component 1.	0.976
AGO3	ENSCAPP00000001916	ENSCAPP00000010319	ENSCAPP00000001916	Argonaute RISC catalytic component 3.	annotation not available	0.884
AGO3	RPP40	ENSCAPP00000010319	ENSCAPP00000002251	Argonaute RISC catalytic component 3.	Ribonuclease P/MRP subunit p40.	0.901
AGO3	SNU13	ENSCAPP00000010319	ENSCAPP00000006647	Argonaute RISC catalytic component 3.	Small nuclear ribonucleoprotein 13.	0.620
ENSCAPP00000001916	AGO1	ENSCAPP00000001916	ENSCAPP00000008559	annotation not available	Argonaute RISC component 1.	0.879
ENSCAPP00000001916	AGO3	ENSCAPP00000001916	ENSCAPP00000010319	annotation not available	Argonaute RISC catalytic component 3.	0.884
ENSCAPP00000001916	KRI1	ENSCAPP00000001916	ENSCAPP00000009385	annotation not available	KRI1 homolog.	0.978
ENSCAPP00000001916	POP1	ENSCAPP00000001916	ENSCAPP00000004787	annotation not available	POP1 homolog, ribonuclease P/MRP subunit.	0.997
ENSCAPP00000001916	POP4	ENSCAPP00000001916	ENSCAPP00000009682	annotation not available	POP4 homolog, ribonuclease P/MRP subunit.	0.999
ENSCAPP00000001916	POP5	ENSCAPP00000001916	ENSCAPP00000017140	annotation not available	POP5 homolog, ribonuclease P/MRP subunit.	0.999
ENSCAPP00000001916	RPP25L	ENSCAPP00000001916	ENSCAPP00000004344	annotation not available	Ribonuclease P/MRP subunit p25 like.	0.986
ENSCAPP00000001916	RPP30	ENSCAPP00000001916	ENSCAPP00000000909	annotation not available	Ribonuclease P/MRP subunit p30.	0.999
ENSCAPP00000001916	RPP40	ENSCAPP00000001916	ENSCAPP00000002251	annotation not available	Ribonuclease P/MRP subunit p40.	0.932
ENSCAPP00000001916	SNU13	ENSCAPP00000001916	ENSCAPP00000006647	annotation not available	Small nuclear ribonucleoprotein 13.	0.981
KRI1	ENSCAPP00000001916	ENSCAPP00000009385	ENSCAPP00000001916	KRI1 homolog.	annotation not available	0.978
KRI1	POP1	ENSCAPP00000009385	ENSCAPP00000004787	KRI1 homolog.	POP1 homolog, ribonuclease P/MRP subunit.	0.993