Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A37Solute carrier family 25 member 37. (280 aa)    
Predicted Functional Partners:
SLC25A28
Solute carrier family 25 member 28.
    
 
 0.976
ABCB10
ATP binding cassette subfamily B member 10.
    
 
 0.887
FXN
Frataxin.
    
 
 0.820
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
     
  0.678
GATB
glutamyl-tRNA amidotransferase subunit B.
     
  0.678
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
    
 
 0.603
NARS2
asparaginyl-tRNA synthetase 2, mitochondrial.
 
   
  0.589
TTC14
Tetratricopeptide repeat domain 14.
      
 0.588
ABCB8
ATP binding cassette subfamily B member 8.
    
 
 0.580
ZHX2
Zinc fingers and homeoboxes 2.
      
 0.567
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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