STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTA2Metastasis associated 1 family member 2. (610 aa)    
Predicted Functional Partners:
HDAC1
Histone deacetylase 1.
   
 0.997
HDAC2
Histone deacetylase 2.
   
 0.996
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.992
MTA1
Metastasis associated 1.
  
 
0.991
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.991
ENSCAPP00000002180
annotation not available
   
 0.980
ENSCAPP00000015653
annotation not available
   
 0.980
ENSCAPP00000005542
annotation not available
    
0.967
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.965
CHD5
Chromodomain helicase DNA binding protein 5.
   
 0.955
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.