STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD6BLY6/PLAUR domain containing 6B. (127 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
   
 0.909
MYO9B
Myosin IXB.
     
 0.814
MYO9A
Myosin IXA.
     
 0.814
RPS6KC1
Ribosomal protein S6 kinase C1.
     
 0.743
ENSCAPP00000000440
annotation not available
    
 0.737
KLC3
Kinesin light chain 3.
    
 0.737
KLC1
Kinesin light chain 1.
    
 0.737
KLC2
Kinesin light chain 2.
    
 0.737
ENSCAPP00000013645
annotation not available
    
 0.737
KLC4
Kinesin light chain 4.
    
 0.737
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.