STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001930annotation not available (226 aa)    
Predicted Functional Partners:
TARS1
threonyl-tRNA synthetase 1.
  
 
 
0.919
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.862
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.831
TARS3
threonyl-tRNA synthetase 3.
  
 
 
0.826
MTIF2
Mitochondrial translational initiation factor 2.
  
 0.819
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.812
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.803
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.792
ENSCAPP00000011486
annotation not available
   
 
 0.782
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.782
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.