Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NHLRC3NHL repeat containing 3. (296 aa)    
Predicted Functional Partners:
PROSER1
Proline and serine rich 1.
    
 0.825
DOK4
Docking protein 4.
      
 0.750
IGSF21
Immunoglobin superfamily member 21.
    
 0.632
FREM2
FRAS1 related extracellular matrix 2.
    
 0.604
LHFPL6
LHFPL tetraspan subfamily member 6.
      
 0.568
FAM222B
Family with sequence similarity 222 member B.
      
 0.567
RBM12B
RNA binding motif protein 12B.
      
 0.511
ARID5A
AT-rich interaction domain 5A.
    
 0.503
ENSCAPP00000001101
annotation not available
    
  0.497
ATG16L2
Autophagy related 16 like 2.
    
 
 0.457
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.