TMEM184A protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TMEM184A

Transmembrane protein 184A. (425 aa)

Predicted Functional Partners:

GABARAPL2

0.776

ENSCAPP00000017351

0.776

ENSCAPP00000010142

0.611

TMEM214

0.553

ENSCAPP00000009620

0.479

ENSCAPP00000010372

0.479

ENSCAPP00000013812

0.479

TINAGL1

0.402

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000009620	ENSCAPP00000013812	ENSCAPP00000009620	ENSCAPP00000013812	annotation not available	annotation not available	0.598
ENSCAPP00000009620	TMEM184A	ENSCAPP00000009620	ENSCAPP00000001932	annotation not available	Transmembrane protein 184A.	0.479
ENSCAPP00000010142	ENSCAPP00000017351	ENSCAPP00000010142	ENSCAPP00000017351	annotation not available	annotation not available	0.805
ENSCAPP00000010142	GABARAPL2	ENSCAPP00000010142	ENSCAPP00000016278	annotation not available	GABA type A receptor associated protein like 2.	0.905
ENSCAPP00000010142	TMEM184A	ENSCAPP00000010142	ENSCAPP00000001932	annotation not available	Transmembrane protein 184A.	0.611
ENSCAPP00000010372	ENSCAPP00000013812	ENSCAPP00000010372	ENSCAPP00000013812	annotation not available	annotation not available	0.600
ENSCAPP00000010372	TMEM184A	ENSCAPP00000010372	ENSCAPP00000001932	annotation not available	Transmembrane protein 184A.	0.479
ENSCAPP00000013812	ENSCAPP00000009620	ENSCAPP00000013812	ENSCAPP00000009620	annotation not available	annotation not available	0.598
ENSCAPP00000013812	ENSCAPP00000010372	ENSCAPP00000013812	ENSCAPP00000010372	annotation not available	annotation not available	0.600
ENSCAPP00000013812	TMEM184A	ENSCAPP00000013812	ENSCAPP00000001932	annotation not available	Transmembrane protein 184A.	0.479
ENSCAPP00000017351	ENSCAPP00000010142	ENSCAPP00000017351	ENSCAPP00000010142	annotation not available	annotation not available	0.805
ENSCAPP00000017351	GABARAPL2	ENSCAPP00000017351	ENSCAPP00000016278	annotation not available	GABA type A receptor associated protein like 2.	0.934
ENSCAPP00000017351	TMEM184A	ENSCAPP00000017351	ENSCAPP00000001932	annotation not available	Transmembrane protein 184A.	0.776
GABARAPL2	ENSCAPP00000010142	ENSCAPP00000016278	ENSCAPP00000010142	GABA type A receptor associated protein like 2.	annotation not available	0.905
GABARAPL2	ENSCAPP00000017351	ENSCAPP00000016278	ENSCAPP00000017351	GABA type A receptor associated protein like 2.	annotation not available	0.934
GABARAPL2	TMEM184A	ENSCAPP00000016278	ENSCAPP00000001932	GABA type A receptor associated protein like 2.	Transmembrane protein 184A.	0.776
TINAGL1	TMEM184A	ENSCAPP00000014262	ENSCAPP00000001932	Tubulointerstitial nephritis antigen like 1.	Transmembrane protein 184A.	0.402
TMEM184A	ENSCAPP00000009620	ENSCAPP00000001932	ENSCAPP00000009620	Transmembrane protein 184A.	annotation not available	0.479
TMEM184A	ENSCAPP00000010142	ENSCAPP00000001932	ENSCAPP00000010142	Transmembrane protein 184A.	annotation not available	0.611
TMEM184A	ENSCAPP00000010372	ENSCAPP00000001932	ENSCAPP00000010372	Transmembrane protein 184A.	annotation not available	0.479