ENSCAPP00000001941 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000001941

annotation not available (87 aa)

Predicted Functional Partners:

PRKAR2B

0.962

SPA17

0.958

PRPF3

0.957

LSM5

0.949

ENSCAPP00000010752

0.903

LSM6

0.886

ENSCAPP00000009761

0.886

PRKACA

0.859

PRKACB

0.859

ENSCAPP00000009391

0.819

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001941	ENSCAPP00000009391	ENSCAPP00000001941	ENSCAPP00000009391	annotation not available	annotation not available	0.819
ENSCAPP00000001941	ENSCAPP00000009761	ENSCAPP00000001941	ENSCAPP00000009761	annotation not available	annotation not available	0.886
ENSCAPP00000001941	ENSCAPP00000010752	ENSCAPP00000001941	ENSCAPP00000010752	annotation not available	annotation not available	0.903
ENSCAPP00000001941	LSM5	ENSCAPP00000001941	ENSCAPP00000004435	annotation not available	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.949
ENSCAPP00000001941	LSM6	ENSCAPP00000001941	ENSCAPP00000005884	annotation not available	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.886
ENSCAPP00000001941	PRKACA	ENSCAPP00000001941	ENSCAPP00000003120	annotation not available	Protein kinase cAMP-activated catalytic subunit alpha.	0.859
ENSCAPP00000001941	PRKACB	ENSCAPP00000001941	ENSCAPP00000017423	annotation not available	Protein kinase cAMP-activated catalytic subunit beta.	0.859
ENSCAPP00000001941	PRKAR2B	ENSCAPP00000001941	ENSCAPP00000002342	annotation not available	Protein kinase cAMP-dependent type II regulatory subunit beta.	0.962
ENSCAPP00000001941	PRPF3	ENSCAPP00000001941	ENSCAPP00000018408	annotation not available	pre-mRNA processing factor 3.	0.957
ENSCAPP00000001941	SPA17	ENSCAPP00000001941	ENSCAPP00000004249	annotation not available	Sperm autoantigenic protein 17.	0.958
ENSCAPP00000009391	ENSCAPP00000001941	ENSCAPP00000009391	ENSCAPP00000001941	annotation not available	annotation not available	0.819
ENSCAPP00000009761	ENSCAPP00000001941	ENSCAPP00000009761	ENSCAPP00000001941	annotation not available	annotation not available	0.886
ENSCAPP00000009761	LSM5	ENSCAPP00000009761	ENSCAPP00000004435	annotation not available	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
ENSCAPP00000009761	PRPF3	ENSCAPP00000009761	ENSCAPP00000018408	annotation not available	pre-mRNA processing factor 3.	0.984
ENSCAPP00000010752	ENSCAPP00000001941	ENSCAPP00000010752	ENSCAPP00000001941	annotation not available	annotation not available	0.903
LSM5	ENSCAPP00000001941	ENSCAPP00000004435	ENSCAPP00000001941	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	annotation not available	0.949
LSM5	ENSCAPP00000009761	ENSCAPP00000004435	ENSCAPP00000009761	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	annotation not available	0.998
LSM5	LSM6	ENSCAPP00000004435	ENSCAPP00000005884	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
LSM5	PRPF3	ENSCAPP00000004435	ENSCAPP00000018408	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	pre-mRNA processing factor 3.	0.998
LSM6	ENSCAPP00000001941	ENSCAPP00000005884	ENSCAPP00000001941	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	annotation not available	0.886