STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GJC1Gap junction protein gamma 1. (392 aa)    
Predicted Functional Partners:
GJA1
Gap junction protein alpha 1.
    
0.965
GJA5
Gap junction protein alpha 5.
    
0.963
GJA4
Gap junction protein alpha 4.
    
0.945
GJB6
Gap junction protein beta 6.
     
0.939
GJD2
Gap junction protein delta 2.
     
0.934
ENSCAPP00000010784
annotation not available
     
 0.926
GJB2
Gap junction protein beta 2.
     
0.923
GJC3
Gap junction protein gamma 3.
  
  
 
0.922
TJP1
Tight junction protein 1.
    
 0.737
ENSCAPP00000002045
annotation not available
    
 0.632
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.